The detailed information of tRNA gene sequence


Sequence ID>WENV170980109
Genome IDMTKZ01125293
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 562
End posion on genome 635
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgatgaaaac
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCACAGCGTTCGGGACGCTGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGAttt
Downstream region at tRNA end position 
tttttaagag
Secondary structure (Cloverleaf model)
>WENV170980109	Pro	CGG
                   c      Attt tttttaagag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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