The detailed information of tRNA gene sequence


Sequence ID>WENV170980113
Genome IDMTKZ01125412
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15013
End posion on genome 15089
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttcgcatga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCACTGGGCTCATAACCCAGAGGTCGTAGGTTCAAA
TCCTACCCCCGCCACCA
Downstream region at tRNA end position 
aatccgggcc
Secondary structure (Cloverleaf model)
>WENV170980113	Met	CAT
                   a      ACCA aatccgggcc
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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