The detailed information of tRNA gene sequence


Sequence ID>WENV170980115
Genome IDMTKZ01125488
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1187
End posion on genome 1112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttggggggtc
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGTCAGAGCAGGGGACTCATAATCCCTGGGTCGCTGGTTCGAAT
CCAGCCGGGCCCACCC
Downstream region at tRNA end position 
tgtgctggac
Secondary structure (Cloverleaf model)
>WENV170980115	Met	CAT
                   c      ACCC tgtgctggac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     GGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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