The detailed information of tRNA gene sequence


Sequence ID>WENV170980121
Genome IDMTKZ01125585
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12820
End posion on genome 12744
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcttggtca
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCAAACGGCTCATATCCGTTGTGTCCGGGGTTCAAC
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
tcctatcctc
Secondary structure (Cloverleaf model)
>WENV170980121	Met	CAT
                   a      ACCA tcctatcctc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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