The detailed information of tRNA gene sequence


Sequence ID>WENV170980123
Genome IDMTKZ01125677
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 616
End posion on genome 541
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggcgtgga
tRNA gene sequence 
TGCGGGATAGGGTAGCCCGGTCGTACCCGCCGGCCTCATAAGCCGGAGATCGCTGGTTCG
AATCCAGCTCCCGCAAtcg
Downstream region at tRNA end position 
gcaccgcgac
Secondary structure (Cloverleaf model)
>WENV170980123	Met	CAT
                   a      Atcg gcaccgcgac
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
    C C G A        A      | | | | |     G
  C         T G G G       G C T G G     C
  G         | | | |                 T T
  G         A C C C
    T C G T        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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