The detailed information of tRNA gene sequence


Sequence ID>WENV170980128
Genome IDMTKZ01125727
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 382
End posion on genome 307
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttcgaaaaa
tRNA gene sequence 
GCCCGCGTAGCTCAGTCGGTAGAGCGCGTCCTTGGTAAGGACGAGGTCACCAGTTCAATT
CTGGTCGCGGGCTCCA
Downstream region at tRNA end position 
ttgaaactcg
Secondary structure (Cloverleaf model)
>WENV170980128	Thr	GGT
                   a      TCCA ttgaaactcg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T T
                    T     T G G T C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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