The detailed information of tRNA gene sequence


Sequence ID>WENV170980142
Genome IDMTKZ01126245
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 45841
End posion on genome 45916
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tctgcgagtt
tRNA gene sequence 
GGGCGATTAACTCAGCGGCTAGAGTACTACCTTCACACGGTAGGAGTCACAGGTTCGAAT
CCTGTATCGCCCACCA
Downstream region at tRNA end position 
ccccttatga
Secondary structure (Cloverleaf model)
>WENV170980142	Val	CAC
                   t      ACCA ccccttatga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    G       C T C A       A C A G G     C
    G       | | | |                 T T
    C       G A G T
      T A          A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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