The detailed information of tRNA gene sequence


Sequence ID>WENV170980146
Genome IDMTKZ01126318
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2179
End posion on genome 2268
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcctgctgc
tRNA gene sequence 
GGAAGGGTGGCTGAGTGGTTAAAGGCACCTGACTCGAAATCAGGCGTAGGGGTAACCCTA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
accttcacaa
Secondary structure (Cloverleaf model)
>WENV170980146	Ser	CGA
                   c      GCCA accttcacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T A A        A     CGTAGGGGTAACCCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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