The detailed information of tRNA gene sequence


Sequence ID>WENV170980154
Genome IDMTKZ01126561
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1502
End posion on genome 1577
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcggtgcgga
tRNA gene sequence 
TGCGGGATAGGGTAGTCCGGTCGTACCCGCTGGCCTCATTAGCCGGAGATCGCTGGTTCG
AATCCAGCTCCCGCAAtcg
Downstream region at tRNA end position 
gcaccgcgac
Secondary structure (Cloverleaf model)
>WENV170980154	Met	CAT
                   a      Atcg gcaccgcgac
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
    C T G A        A      | | | | |     G
  C         T G G G       G C T G G     C
  G         | | | |                 T T
  G         A C C C
    T C G T        G     AGATC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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