The detailed information of tRNA gene sequence


Sequence ID>WENV170980161
Genome IDMTKZ01126777
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4001
End posion on genome 3911
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtttcccaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGGCGGCCTCGAAAGCCGTTGTGCGGTTTTACCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttattctctt
Secondary structure (Cloverleaf model)
>WENV170980161	Ser	CGA
                   a      GCCA ttattctctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCGGTTTTACCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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