The detailed information of tRNA gene sequence


Sequence ID>WENV170980163
Genome IDMTKZ01126784
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7223
End posion on genome 7134
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcggcttggt
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCCGAAGGCGCCTGACTCGAAATCAGGTTTACGGGCGACCGTA
ACGGGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atatttttat
Secondary structure (Cloverleaf model)
>WENV170980163	Ser	CGA
                   t      GCCA atatttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TTTACGGGCGACCGTAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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