The detailed information of tRNA gene sequence


Sequence ID>WENV170980181
Genome IDMTKZ01127020
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3034
End posion on genome 2959
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttacccatgc
tRNA gene sequence 
GGCCCGTTCATCTAGGGGTCTAGGATGCGGGATTCTCAGTCCCGTTACAGGGGTTCGAAT
CCCCTACGGGCTGCCA
Downstream region at tRNA end position 
tctttcattt
Secondary structure (Cloverleaf model)
>WENV170980181	Glu	CTC
                   c      GCCA tctttcattt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T A       A G G G G     C
    G       + | | |                 T T
    T       G G A T
      C T A        G     TTAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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