The detailed information of tRNA gene sequence


Sequence ID>WENV170980183
Genome IDMTKZ01127149
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4773
End posion on genome 4686
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgtggtattt
tRNA gene sequence 
GCCGTGGTGGCGGAATGGTATACGCGGTGGTCTCAAAAACCACTGGGAATTAAATCCTGT
GTGGGTTCGACTCCCACCCACGGCACCA
Downstream region at tRNA end position 
atttattttt
Secondary structure (Cloverleaf model)
>WENV170980183	Leu	CAA
                   t      ACCA atttattttt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      A T          G     TGGGAATTAAATCCTGT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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