The detailed information of tRNA gene sequence


Sequence ID>WENV170980187
Genome IDMTKZ01127213
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 589
End posion on genome 662
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaataaac
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCACGCGGCTCATACCCGCGGCGTAGAGGGTTCGAA
TCCCTCCCTCGCTAata
Downstream region at tRNA end position 
tttttatcgc
Secondary structure (Cloverleaf model)
>WENV170980187	Met	CAT
                   c      Aata tttttatcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GCGTA
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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