The detailed information of tRNA gene sequence


Sequence ID>WENV170980205
Genome IDMTKZ01127732
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2817
End posion on genome 2893
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cattgttttt
tRNA gene sequence 
GGGCTCATAGCTCAGACGGTTAGAGCGTTGCATTCACATTGCAAAGGTCTCAGGTTCGAG
TCCTGATGAGCCCACCA
Downstream region at tRNA end position 
aaatgacttt
Secondary structure (Cloverleaf model)
>WENV170980205	Val	CAC
                   t      ACCA aaatgacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     A G T C C     A
      A G A        A      | | | | |     G
    C       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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