The detailed information of tRNA gene sequence


Sequence ID>WENV170980210
Genome IDMTKZ01127811
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1574
End posion on genome 1499
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
agggaatatc
tRNA gene sequence 
GGGCCGCTAGCTCAGTCGGTAGAGCAGTTGACTCTTAATCAATTGGTCGCAGGTTCGAGT
CCTGTGCGGCCCACCA
Downstream region at tRNA end position 
gtcaacgcgg
Secondary structure (Cloverleaf model)
>WENV170980210	Lys	CTT
                   c      ACCA gtcaacgcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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