The detailed information of tRNA gene sequence


Sequence ID>WENV170980212
Genome IDMTKZ01127911
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 438
End posion on genome 366
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtccggcccc
tRNA gene sequence 
GGCCCCATCGTCTAGTGGTCTAGGACACCGGCTTTTCACGCCGGCAACGGGGGTTCGAGT
CCCCCTGGGGTCAgtt
Downstream region at tRNA end position 
gagcagtgcc
Secondary structure (Cloverleaf model)
>WENV170980212	Glu	TTC
                   c      Agtt gagcagtgcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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