The detailed information of tRNA gene sequence


Sequence ID>WENV170980213
Genome IDMTKZ01128036
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8333
End posion on genome 8259
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgatcgcccc
tRNA gene sequence 
CGGGGCGTAGCTCAGCCTGGCTAGAGCGTGTGGTTTGGGACCACAAGGTCGCTGGTTCGA
ATCCAGTCGCCCCGAgtc
Downstream region at tRNA end position 
gcgcaaggtt
Secondary structure (Cloverleaf model)
>WENV170980213	Pro	TGG
                   c      Agtc gcgcaaggtt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    C C G A        A      + | | | |     G
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    T - A
                    G - C
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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