The detailed information of tRNA gene sequence


Sequence ID>WENV170980216
Genome IDMTKZ01128081
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 387
End posion on genome 475
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggccgtgtT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCACGCTTGGAAAGCGTGTGTACGGGTAACCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGGtc
Downstream region at tRNA end position 
cgggtggagg
Secondary structure (Cloverleaf model)
>WENV170980216	Ser	GGA
                   T      GGtc cgggtggagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTACGGGTAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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