The detailed information of tRNA gene sequence


Sequence ID>WENV170980217
Genome IDMTKZ01128108
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 599
End posion on genome 694
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tggacaagtc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCGCACGACTGGAAATCGTGTGGACGGGCCATAAAG
TCTGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caaaagtttt
Secondary structure (Cloverleaf model)
>WENV170980217	Ser	GGA
                   c      GCCA caaaagtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGGACGGGCCATAAAGTCTGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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