The detailed information of tRNA gene sequence


Sequence ID>WENV170980222
Genome IDMTKZ01128253
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1573
End posion on genome 1499
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tgaaatgcgt
tRNA gene sequence 
TCCGGAATAGCTCAATGGTAGAGCAGGTGGCTGTTAACCACTTGGTTGGGGGTTCGAATC
CCTCTTCCGGAGCCA
Downstream region at tRNA end position 
tttttttgta
Secondary structure (Cloverleaf model)
>WENV170980222	Asn	GTT
                   t      GCCA tttttttgta
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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