The detailed information of tRNA gene sequence


Sequence ID>WENV170980226
Genome IDMTKZ01128531
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9230
End posion on genome 9155
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttccggcg
tRNA gene sequence 
GCCCCCATCGTCTAGTGGCCTAGGATATCAGGTTCTCATCCTGAAGACAGGGGTTCGAGT
CCCCTTGGGGGTGCCA
Downstream region at tRNA end position 
ttcaaatcag
Secondary structure (Cloverleaf model)
>WENV170980226	Glu	CTC
                   g      GCCA ttcaaatcag
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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