The detailed information of tRNA gene sequence


Sequence ID>WENV170980230
Genome IDMTKZ01128665
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2082
End posion on genome 2007
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattggttga
tRNA gene sequence 
GCCAGTGTAGCCCAGGGGTTAGAGCGGGCGTTTCATAAGCGCTAGGTCGGTGGTTCGAGT
CCACCCACTGGCACCA
Downstream region at tRNA end position 
gtaagtttat
Secondary structure (Cloverleaf model)
>WENV170980230	Met	CAT
                   a      ACCA gtaagtttat
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C A C C     A
      G G A        A      | | | | |     G
    G       C C C G       G G T G G     C
    G       |   | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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