The detailed information of tRNA gene sequence


Sequence ID>WENV170980241
Genome IDMTKZ01128852
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4112
End posion on genome 4038
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgacgcagaT
tRNA gene sequence 
GGGGACGTAGCTCAATTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGGGTTCGAAT
CCCCTCGTCTCCATtt
Downstream region at tRNA end position 
tccgcaaacg
Secondary structure (Cloverleaf model)
>WENV170980241	Ala	CGC
                   T      ATtt tccgcaaacg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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