The detailed information of tRNA gene sequence


Sequence ID>WENV170980246
Genome IDMTKZ01129042
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2235
End posion on genome 2143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcaatggttt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCTCTAAAGGC
GTATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcttcttcg
Secondary structure (Cloverleaf model)
>WENV170980246	Ser	GCT
                   t      GCCA ttcttcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCTCTAAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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