The detailed information of tRNA gene sequence


Sequence ID>WENV170980250
Genome IDMTKZ01129213
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11885
End posion on genome 11796
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgattgaacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCTATCGCGGCGGTCTTGAAAACCGCTTCGGCTTAACAGCCG
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggaaatgatg
Secondary structure (Cloverleaf model)
>WENV170980250	Ser	TGA
                   c      GCCA ggaaatgatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C T A        G     TTCGGCTTAACAGCCGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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