The detailed information of tRNA gene sequence


Sequence ID>WENV170980254
Genome IDMTKZ01129492
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2309
End posion on genome 2222
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatatttat
tRNA gene sequence 
AGAAGGGTGGCTGAGTGGTTTAAAGCGGCAGTCTTGAAAACTGTTGGGTGTCAAAGCCCC
GGGGGTTCGAATCCCTATCCTTCTGCCA
Downstream region at tRNA end position 
attttggaaa
Secondary structure (Cloverleaf model)
>WENV170980254	Ser	TGA
                   t      GCCA attttggaaa
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     A T C C C     A
      T G A        G        + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGGGTGTCAAAGCCCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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