The detailed information of tRNA gene sequence


Sequence ID>WENV170980255
Genome IDMTKZ01129492
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2217
End posion on genome 2125
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgccaatttT
tRNA gene sequence 
GGAAATGTGGCTGAGTGGTTTAAAGCGGTTCCTTGCTAAGGAATTGAGGTACATAATATG
GCCTCCGCTGGTTCGAATCCAGCCGTTTCCGTtt
Downstream region at tRNA end position 
aatatcaacc
Secondary structure (Cloverleaf model)
>WENV170980255	Ser	GCT
                   T      GTtt aatatcaacc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T + G
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C T G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGAGGTACATAATATGGCCTCC
                    G + T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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