The detailed information of tRNA gene sequence


Sequence ID>WENV170980271
Genome IDMTKZ01130257
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2323
End posion on genome 2251
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcccgtgg
tRNA gene sequence 
AGGAGCGTAGCTCAATTGGCAGAGCACCGGTTTCCAAAACCGGCGGTTGGGGGTTCAAAT
CCCTCCGCTCCTGtgt
Downstream region at tRNA end position 
gaaggacgaa
Secondary structure (Cloverleaf model)
>WENV170980271	Trp	CCA
                   g      Gtgt gaaggacgaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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