The detailed information of tRNA gene sequence


Sequence ID>WENV170980282
Genome IDMTKZ01131200
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2335
End posion on genome 2259
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaaaaaagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCTGGTTCAAA
TCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
ttttattagt
Secondary structure (Cloverleaf model)
>WENV170980282	Pro	TGG
                   t      ACCA ttttattagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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