The detailed information of tRNA gene sequence


Sequence ID>WENV170980291
Genome IDMTKZ01131821
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1405
End posion on genome 1323
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ttatttccgg
tRNA gene sequence 
GGGCGAGTGGCGGAATTGGCATACGCGCACGGCTTAGGACCGTGTCCGAAAGGGGGGAGG
TTCGAGTCCTCTCTCGCCCACCA
Downstream region at tRNA end position 
gcgaaacaga
Secondary structure (Cloverleaf model)
>WENV170980291	Leu	TAG
                   g      ACCA gcgaaacaga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A T        G     TCCGAAAGGGG
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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