The detailed information of tRNA gene sequence


Sequence ID>WENV170980294
Genome IDMTKZ01132001
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 279
End posion on genome 354
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tcctcatacg
tRNA gene sequence 
GTGGTTGTAGCTCAGTTGGTTAGAGCGCCAGATTGTGGCTCTGGAGGTCGCGAGTTCGAA
TCTCGTCTTCCACCCAa
Downstream region at tRNA end position 
aaacgttttc
Secondary structure (Cloverleaf model)
>WENV170980294	His	GTG
                   g      CCAa aaacgttttc
                     G - C
                     T - A
                     G - C
                     G - C
                     T   T
                     T   T
                     G - C          T A
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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