The detailed information of tRNA gene sequence


Sequence ID>WENV170980298
Genome IDMTKZ01132125
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2948
End posion on genome 2858
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttggattt
tRNA gene sequence 
GGAGGGATACCGAAGCGGTCATAACGGGCTAGTCTCGAAAACTAAGCGTGATGAAAGTCA
CCCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gtgagaacca
Secondary structure (Cloverleaf model)
>WENV170980298	Ser	CGA
                   t      GCCA gtgagaacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     GCGTGATGAAAGTCACCC
                    C   A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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