The detailed information of tRNA gene sequence


Sequence ID>WENV170980304
Genome IDMTKZ01132442
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2135
End posion on genome 2224
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatatataa
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTTGATCGGGACGGTCTCGAAAACCGTTGTATCCTTTCGGATA
CCCAGGGTTCAAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
taatcctatg
Secondary structure (Cloverleaf model)
>WENV170980304	Ser	CGA
                   a      GCCA taatcctatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTATCCTTTCGGATACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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