The detailed information of tRNA gene sequence


Sequence ID>WENV170980309
Genome IDMTKZ01132619
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 910
End posion on genome 834
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atcttttttg
tRNA gene sequence 
CGGGATGTGGCGCAGCTTGGTAGCGCGATTGCTTCGGGAGTAATAGGCCGCAGGTTCAAA
TCCTGTCATCCCGACCA
Downstream region at tRNA end position 
ttatttgaaa
Secondary structure (Cloverleaf model)
>WENV170980309	Pro	CGG
                   g      ACCA ttatttgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    A - T
                    T - A
                    T - A
                    G + T
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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