The detailed information of tRNA gene sequence


Sequence ID>WENV170980314
Genome IDMTKZ01132818
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 979
End posion on genome 892
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaaacaaaa
tRNA gene sequence 
GGAGAGATGGGTGAGTGGTTTAAACCGGCAGTCTTGAAAACTGTTGAAGTGAAAGCTTCC
GGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
agcacgaaag
Secondary structure (Cloverleaf model)
>WENV170980314	Ser	TGA
                   a      GCAA agcacgaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    T       A A C C
      T T A        G     TGAAGTGAAAGCTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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