The detailed information of tRNA gene sequence


Sequence ID>WENV170980327
Genome IDMTKZ01133844
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1330
End posion on genome 1257
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcaccacct
tRNA gene sequence 
AGGGCAATAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCAAGT
CCCTCTTGCCCTGCtg
Downstream region at tRNA end position 
caggactgtg
Secondary structure (Cloverleaf model)
>WENV170980327	Trp	CCA
                   t      GCtg caggactgtg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T G
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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