The detailed information of tRNA gene sequence


Sequence ID>WENV170980340
Genome IDMTKZ01134265
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1985
End posion on genome 2075
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gggacgaagc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGCTTAAGGCACCCGACTCGAAATCGGGCGGGCGTGAAGAGCGC
CCCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
attccacgag
Secondary structure (Cloverleaf model)
>WENV170980340	Ser	CGA
                   c      GCCA attccacgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CGGGCGTGAAGAGCGCCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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