The detailed information of tRNA gene sequence


Sequence ID>WENV170980341
Genome IDMTKZ01134423
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54
End posion on genome 129
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaccttttt
tRNA gene sequence 
GGGGGGATGGCTCAGCTGGGAGAGCACTTGGCTGGCAGCCAAGGGGTCAGGGGTTCGAAT
CCCCTTACCTCCACCA
Downstream region at tRNA end position 
atgcgagggg
Secondary structure (Cloverleaf model)
>WENV170980341	Ala	GGC
                   t      ACCA atgcgagggg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G   A
                     A - T          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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