The detailed information of tRNA gene sequence


Sequence ID>WENV170980342
Genome IDMTKZ01134484
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 172
End posion on genome 259
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaatagtcg
tRNA gene sequence 
GGAGACGTGTCCGAACTGGCTAAGGGGCCGGTCTTGAAAACCGGTGGAGCCATGCTCCGT
GTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
aaaaaggagt
Secondary structure (Cloverleaf model)
>WENV170980342	Ser	TGA
                   g      GCCA aaaaaggagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TGGAGCCATGCTCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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