The detailed information of tRNA gene sequence


Sequence ID>WENV170980343
Genome IDMTKZ01134841
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 982
End posion on genome 1075
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataatcagac
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCATAACGGGACCGACTCGAAATCGGTTTGAGGGCCAAAAGC
CCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattgtgaa
Secondary structure (Cloverleaf model)
>WENV170980343	Ser	CGA
                   c      GCCA ttattgtgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGAGGGCCAAAAGCCCTCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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