The detailed information of tRNA gene sequence


Sequence ID>WENV170980344
Genome IDMTKZ01134841
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1118
End posion on genome 1212
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgactttaag
tRNA gene sequence 
GGAGAGATGCCAGAGAGGCCGAATGGGCACGACTGGAAATCGTGTGTGCGCCCCTCAAAG
GTGCACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gatgtctatt
Secondary structure (Cloverleaf model)
>WENV170980344	Ser	GGA
                   g      GCCA gatgtctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTGCGCCCCTCAAAGGTGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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