The detailed information of tRNA gene sequence


Sequence ID>WENV170980350
Genome IDMTKZ01135265
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2258
End posion on genome 2184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctattttaat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACCA
Downstream region at tRNA end position 
tatataaata
Secondary structure (Cloverleaf model)
>WENV170980350	Met	CAT
                   t      ACCA tatataaata
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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