The detailed information of tRNA gene sequence


Sequence ID>WENV170980352
Genome IDMTKZ01135567
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1377
End posion on genome 1305
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcccgacag
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGtcc
Downstream region at tRNA end position 
accacaccat
Secondary structure (Cloverleaf model)
>WENV170980352	Trp	CCA
                   g      Gtcc accacaccat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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