The detailed information of tRNA gene sequence


Sequence ID>WENV170980356
Genome IDMTKZ01135886
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1200
End posion on genome 1125
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcctagaagc
tRNA gene sequence 
AGGTCCGTAGCTCAATTGGTAGAGCACTGGTCTCCAAAATCAGTTGTTGGGGGTTCGAGA
CCCTCCGGGCCTGCCA
Downstream region at tRNA end position 
atttttttaa
Secondary structure (Cloverleaf model)
>WENV170980356	Trp	CCA
                   c      GCCA atttttttaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTT
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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