The detailed information of tRNA gene sequence


Sequence ID>WENV170980366
Genome IDMTKZ01136596
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1107
End posion on genome 1032
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacccacat
tRNA gene sequence 
TGCGGGGTAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGT
CCTGTCCCCGCTACAA
Downstream region at tRNA end position 
aaaaaagtga
Secondary structure (Cloverleaf model)
>WENV170980366	Met	CAT
                   t      ACAA aaaaaagtga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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