The detailed information of tRNA gene sequence


Sequence ID>WENV170980367
Genome IDMTKZ01136786
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2334
End posion on genome 2406
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgacacccac
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGTGAGTTCGACT
CTCATCGGCTCCAgtt
Downstream region at tRNA end position 
ccgtaagacc
Secondary structure (Cloverleaf model)
>WENV170980367	Ala	GGC
                   c      Agtt ccgtaagacc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T A C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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