The detailed information of tRNA gene sequence


Sequence ID>WENV170980389
Genome IDMTKZ01138905
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 582
End posion on genome 504
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatttgcgg
tRNA gene sequence 
AGCGGTGTAGAGAAGTCTGGCCGTTCTCGTTGGGCTCATAACCTAAAGCTCGTAGGTTCG
AATCCTACTGCCGCCACTA
Downstream region at tRNA end position 
atacttgcta
Secondary structure (Cloverleaf model)
>WENV170980389	Met	CAT
                   g      ACTA atacttgcta
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G + T          T A
                    T     C A T C C     A
    C T G A        A      | | | | |     G
  T         A G A G       G T A G G     C
  G         | | | |                 T T
  G         T C T C
    C C G T        G     AGCTC
                    T - A
                    T - A
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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