The detailed information of tRNA gene sequence


Sequence ID>WENV170980392
Genome IDMTKZ01139501
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 372
End posion on genome 296
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaaacactT
tRNA gene sequence 
CGGAGCGTAGTTCAGTTGGCTTAGAACCCGCGGTTTGGGACCGCGAGGTCGAGAGTTCAA
GTCTCTCCGCTCCGATtt
Downstream region at tRNA end position 
taaaaattta
Secondary structure (Cloverleaf model)
>WENV170980392	Pro	TGG
                   T      ATtt taaaaattta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
    T T G A        A      | | | | |     A
  G         C T T G       G A G A G     C
  G         | | | |                 T T
  C         G A A C
    T T A          C     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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