The detailed information of tRNA gene sequence


Sequence ID>WENV170980395
Genome IDMTKZ01139680
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 551
End posion on genome 635
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agcttgtcag
tRNA gene sequence 
GCCCGGATGGCGGAATGGTAGACGCCGCGGCCTTAAAAGCCGCTGCTCCTCAGGGGGCGT
GCGGGTTCGAATCCCGCTCCGGGTAtct
Downstream region at tRNA end position 
tttcggcgat
Secondary structure (Cloverleaf model)
>WENV170980395	Leu	TAA
                   g      Atct tttcggcgat
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      A G          C     TGCTCCTCAGGGGGCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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